Cai Zhen-Rong, Sukma Dewi, (Chan Ming-Tsair*) (2025) Balancing nature and technology: enhancing flowering in ornamental plants. Botanical Studies, 66(1), 41
Zhang Yasha, Ablazov Abdugaffor, Balakrishna Aparna, Rajan Chakravarthy, Alagoz Yagiz, Liew Kit Xi, Berqdar Lamis, Wang Jian You, Blilou Ikram, Zheng Xiongjie, Al‐Babili Salim (2025) An evolutionarily diverged CCD4 enzyme negatively regulates mesocotyl elongation in rice. New Phytologist, 70799, 70799
Balladona Freta Kirana, Li Chia-Wen, Lin Yao-Cheng, Cai Zhen-Rong, Lan Tsun Ho, Ohme-Takagi Masaru, Sukma Dewi, (Chan Ming-Tsair*) (2025) SlbHLH053 and AtMSRB5 synergistically enhance salt tolerance in transgenic tomatoes. Plant Stress, 18, 101029
Mazzarella Teresa, Giovannini Luca, Chen Guan‐Ting Erica, Votta Cristina, Pagliarani Chiara, Wang Jian You, Asami Tadao, Lanfranco Luisa, Al‐Babili Salim, Balestrini Raffaella, Fiorilli Valentina (2025) Boosting Drought Resilience in Rice: The Priming Effects of Zaxinone and Its Mimics. Physiologia Plantarum, 177(6), e70667
Shahul Hameed Umar F., Balakrishna Aparna, Wang Jian You, Alvarez Derry, Momin Afaque A., Schwarzenberg Adrian, Al-Babili Salim, Arold Stefan T. (2025) Molecular Basis for Catalysis and Regulation of the Strigolactone Catabolic Enzyme CXE15. Nature Communications, 16(1), 10290
Puyam Tondonba Singh, Bo-Han Hou, Yi-Heng Tsai, Yuh Tzean, Chih-Ping Chao, Po-Xing Zheng, (Yao-Cheng Lin), Wei-Chiang Shen, Hsin-Hung Yeh, Ho-Ming Chen (2025) Chromosomal deletions in banana somaclonal variants reveal negative regulators of immunity underlying Fusarium wilt resistance. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 122(48), e2511842122
Freta Kirana Balladona, Chia-Wen Li, (Yao-Cheng Lin), Zhen-Rong Cai, Tsun Ho Lan, Masaru Ohme-Takagi, Dewi Sukma, Ming-Tsair Chan (2025) SlbHLH053 and AtMSRB5 synergistically enhance salt tolerance in transgenic tomatoes. PLANT STRESS, 18, 101029
12. Balladona, FK., Li, C,-W., Lin, T.-C., Cai, Z.-R., Lam, T.H. Ohme-Takagi, M., Sukma, D., Chan, M.-T.* (2025) SlbHLH053 and AtMSRB5 Synergistically Enhance Salt Tolerance in Transgenic Tomatoes.. Plant Stress, 18, 101029
Po-Xing Zheng, Chia-Ying Ko, Jheng-Yan Ou, Andrea Zuccolo, (Yao-Cheng Lin) (2025) Transposable elements drive evolution and perturb gene expression in Brassica rapa and B. oleracea. PLANT JOURNAL, 123 (5), e70452
Hua-Chen Chang, I-Chian Chen, Jhun-Chen Chen, Yueh-Ju Hou*, (Su-Chiung Fang)* (2025) Water as a compass: hydrostimulation-triggered aerial root growth in Phalaenopsis aphrodite. PHYSIOLOGIA PLANTARUM, 177(5): e70505. https://doi.org/10.1111/ppl.70505
Yen-Ling Lin, Eva Yuhua Kuo, Shih-Yi Wang, Chih-Chi Lee, (Su-Chiung Fang)* (2025) Optimized ribosome profiling reveals new insights into translational regulation in synchronized Chlamydomonas reinhardtii cultures. PLANT CELL AND ENVIRONMENT, 48 (9): 6982–7000. https://doi.org/10.1111/pce.15681
Alsharif Wiam, Andrés‐Barrao Cristina, Parween Sabiha, Hashim Abdulrahman, Shekhawat Kirti, Abrouk Michael, Wang Jian You, Marasco Ramona, Krattinger Simon G., Daffonchio Daniele, Al‐Babili Salim, Saad Maged M., Hirt Heribert (2025) Switch From Soil to Plant Host Lifestyle Is Mediated by rpoS Mutations in Bacterial Endophyte. Plant, Cell & Environment, 48(11), 8068-8085.
Ming-Ren Yen , Ya-Ru Li , Chia-Yi Cheng, Ting-Ying Wu*, Ming-Jung Liu* (2025) TISCalling: leveraging machine learning to identify translational initiation sites in plants and viruses. PLANT MOLECULAR BIOLOGY, 115(4), 102
Wang Jian You, Jamil Muhammad, Tareq Berqdar Lamis M., Takahashi Ikuo, Ota Tsuyoshi, Asami Tadao, Al-Babili Salim (2025) Structural substitutions on the methoxybenzene ring retain the biological activity of the zaxinone mimics MiZax3. Frontiers in Plant Science, 16, 1631066
Sarker MH, Hussain MH, Neik TX, Hasan MZ, Shayan U, Wee WY, Tan HS, Ko S-S, Song B-K. (2025) Hot off the genes: uncovering differentially expressed genes in Malaysian weedy rice in response to heat stress. Euphytica, 221, 1-19
Alshareef Nouf O., Melino Vanessa J., Saber Noha, De Rosa Annamaria, Rey Elodie, Wang Jian You, AlBabili Salim, Byrt Caitlin, Tester Mark A., Julkowska Magdalena M. (2025) Root remodeling mechanisms and salt tolerance trade-offs: The roles of HKT1, TMAC2, and TIP2;2 in Arabidopsis. PLOS Genetics, 21(6), e1011713
(Swee-Suak Ko), Tzu-Rung Li, Jo-Chi Hung, Hsien-chang Kuo, Min-Jeng Li, Jeng-Bin Lin, Ping-Han Chung, Lin-Hsiang Lee, Yueh-Hua Lin, Hong-Ping Lin, Charles C.-K. Chou*, Kuo-Chen Yeh* (2025) Seasonal growth and biomass production of cold-tolerant Napier Grass line L2201. Biomass and Bioenergy,
Jamil Muhammad, Mutinda Sylvia, Wang Jian You, Barminga Damaris, Mwihaki Agnes, Navangi Lynet, Okiyo Teresa O., Patil Rohit H., Ngatia Titus, Mudavadi Patrick, Runo Steven, Al-Babili Salim (2025) Evaluation of formulated strigolactone analogs for Striga management in Kenyan agriculture. Journal of Agriculture and Food Research, 21, 101921
Salem Mohamed A, Jamil Muhammad, Wang Jian You, Berqdar Lamis, Liew Kit Xi, Paramita Anggra, Ablazov Abdugaffor, Balakrishna Aparna, Al-Babili Salim (2025) Disruption of the Karrikin Receptor DWARF 14 LIKE (D14L) Gene Leads to Distinct Effects on Root and Shoot Growth, and Reprogramming of Central Metabolism in Rice. Journal of Experimental Botany, eraf201
Bukhamsin Abdullah H., Shetty Saptami S., Fakeih Esraa, Martinez Mario Soto, Lerma Cecilia, Mundummal Mufeeda, Wang Jian You, Kosel Jürgen, Al-Babili Salim, Blilou Ikram, Salama Khaled N. (2025) In vivo dynamics of indole- and phenol-derived plant hormones: Long-term, continuous, and minimally invasive phytohormone sensor. Science Advances, 11(16), eads873
Jalal Arshad, Abdelaziz Mohamed E., Salem Mohamed, Liew Kit Xi, Wang Jian You, Alrasheed Wafa, Al Ateeq Talal K., Althobiti Sahar, Qaryouti Muien, Al Soqeer Abdulrahman, Jamil Muhammad, Al‐Babili Salim (2025) Mimics of the Growth Regulator Zaxinone Increase Saffron Yield and Improve its Nutritional Value. Journal of Plant Growth Regulation, https://doi.org/10.1007/s00344-025-11690-y
Pelletier JM, Chen M, Lin JY, Le B, Kirkbride RC, Hur J, Wang T, Chang SH, Olson A, Nikolov L, Goldberg RB, Harada JJ (2025) Dissecting the cellular architecture and genetic circuitry of the soybean seed.. Proceedings of the National Academy of Sciences of the United States of America, 122(1), e2416987121
Oyarce Paula, Xiao Ting Ting, Henkel Corinna, Frederiksen Signe Frost, Gonzalez-Kise Jose Kenyi, Smet Wouter, Wang Jian You, Al-Babili Salim, Blilou Ikram (2025) Microscopy and spatial-metabolomics identify tissue-specific metabolic pathways uncovering salinity and drought tolerance mechanisms in Avicennia marina and Phoenix dactylifera roots. Scientific Reports, 15, 1076
Cho YT, Ting HM, Wang BW, Tsai YC, Wang HY, Yang YL, Ariyawansa HA (2025) Integrating genomics and targeted metabolite profiling to elucidate disease-suppression mechanisms of Bacillus velezensis GFB08.. Current research in microbial sciences, 9, 100503
Chen, C.C.*, W.T. Sun, Y.P. Ho, Y.J. Lin, and S.S. Ko* (2025) Fusarium oxysporum f. sp. phalaenopsidis, a Novel Forma Specialis Causing Leaf Yellowing of Orchids. Plant Disease, DOI: 10.1094/PDIS-11-24-2335
Chen Y-W, Ko S-S*, Liu K-H, Chiu L-J, Lin Y-J, Lin FY-S, Hsiao C-H* (2025) Dual federated learning for small enterprises with collaborative approaches to filtering and predicting double-spike rates of Phalaenopsis orchids
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Balladona, FK., Li, C,-W., Lin, T.-C., Cai, Z.-R., Lam, T.H. Ohme-Takagi, M., Sukma, D., Chan, M.-T.* (2025) SlbHLH053 and AtMSRB5 Synergistically Enhance Salt Tolerance in Transgenic Tomatoes.. Plant Stress, 101029. DOI: 10.1016/j.stress.2025.101029
Ochatt, S.J., Akin, M., Chan, M.-T., Dolgov, S.V., Eimert, K., Flachowsky, H., Guo, W.W., Jiménez, M.V., Lambardi, M., Moncaleán, P., Mourão Filho, F.A.A., Pathirana, R., Wang, Q.C., and Winkelmann, T, (2025) Research is rendering the recalcitrant woody plants amenable to biotechnological approaches.. Plant Cell Tissue and Organ Culture , 161:1-7. DOI: 10.1007/s11240-025-03087-2
Po-Xing Zheng, Chia-Ying Ko, Jheng-Yan Ou, Andrea Zuccolo, Yao-Cheng Lin (2025) Transposable elements drive evolution and perturb gene expression in Brassica rapa and B. oleracea. Plant Journal,
Berqdar Lamis, Salem Mohamed, Wang Jian You, Alrudayan Amer, Jamil Muhammad, Al-Babili Salim (2025) Development of a Rapid and Efficient Protocol for Seed Germination and Seedling Establishment of Oryza coarctata. BIO-PROTOCOL, 15(1365)
Toopaang W, Yoocha T, Naktang C, Wichienchote N, Pechsrichuang P, Tangphatsornruang S, Tanticharoen M, Yang YL, Amnuaykanjanasin A (2025) Transcriptomic insights into the interplay between polyketide biosynthesis and other secondary metabolite biosynthetic clusters and biological pathways in entomopathogen Beauveria bassiana.. Frontiers in microbiology, 16, 1583637
Huang H, Yang CY, Wang SW, Salendra L, Chen SR, Ke TY, Yang YL, Lin YC, Cheng YB (2025) Terpenoids with Antiangiogenic Activity from Formosan Soft Coral Caementabunda hypotentaculata.. Marine biotechnology (New York, N.Y.), 27(2), 71
Hong MX, Wang BW, Lo LH, Jayalath GED, Lin WT, Yang YL, Tseng SP, Chen YH, Tsai WC, Cheng WC, Liaw CC (2025) Pseudopeptides of Marine Vibrio spp. from Taiwan and Their Combined Treatment Effects with Commercial Antibiotics.. Planta medica, 91(6-07), 371-381
Hsiao,Y.C. Shiue, S.Y. Yen, M.R. Lai, J.K. Yamada, M. (2025) The peptide hormone RGF1 modulates PLETHORA2 stability via reactive oxygen species-dependent regulation of a cysteine residue. PLANT PHYSIOLOGY,
(Yao-Cheng Lin), Tin-Yu Wu, Chu-Fu Wang, Jheng-Yang Ou, Te-Chang Hsu, Shiyang Lyu, Ling Cheng, Yu-Xiu Lin, David Taniar (2025) An Intelligent Plant Watering Decision Support System for Drought Monitoring & Analysis Based on AIoT and an LSTM Time-Series Framework. INTERNET OF THINGS,
